SEA - Browser View 1.2 version

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Please Input The Particular Genomic location/Gene ID/Gene Name

H3K27ac across cell-types/tissues

p300 across cell-types/tissues

DNA Methylation

Expression

TFBS by ChIP-seq

Conservation

conservation score

4DGenome

"3C, 4C, 5C, ChIA-PET, Hi-C, Capture-C and IM-PET"

SpCas9 Target Site

Seed sequence for SpCas9 target site

Genomes

Human Dec. 2013
(GRCh38/hg38)
Mouse Dec. 2011
(GRCm38/mm10)
D. melanogaster Aug. 2014
(BDGP Release 6 + ISO1 MT/dm6)
C. elegans Oct. 2010
(WS220/ce10)
Zebrafish May 2017
(GRCz11/danRer11)
Chicken Dec 2015
(Gallus_gallus-5.0/galGal5)
Chimp May 2016
(Pan_tro 3.0/panTro5)
Rhesus Nov. 2015
(BCM Mmul_8.0.1/rheMac8)
Sheep Aug. 2012
(ISGC Oar_v3.1/oviAri3)
X.tropicalis Jul. 2016
(Xenopus_tropicalis_v9.1/xenTro9)
Stickleback Feb. 2006
(Broad/gasAcu1)

BoneMarrow	bone marrow macrophage	breast epithelium
brown adipose tissue	Cerebellum	CH12.LX
Cortex	embryonic facial prominence	embryonic fibroblast
ES-Bruce4	ES-E14	forebrain
heart	hidbrain	intestine
kidney	limb	liver
lung	MEL cell line	midbrain
neural tube	Olfact Bulb	Placenta
small intestine	Spleen	stomach
Testis	Thymus	WholeBrain

WGBS from embryonic facial prominence	MEF_RRBS_MspI	heart
WGBS from forebrain	WGBS from hindbrain	WGBS from intestine
WGBS from kidney	WGBS from limb	WGBS from liver
WGBS from lung	WGBS from midbrain	WGBS from neural tube
mouse_placenta	Small-Intestine_8W-BS-rep1	WGBS from neural tube

LFD BAT 1	total RNA-seq from embryonic facial prominence	polyA mRNA RNA-seq from ES-Bruce4
total RNA-seq from ES-E14	total RNA-seq from forebrain	total RNA-seq from hindbrain
total RNA-seq from intestine	single cell RNA-seq from liver	total RNA-seq from liver
total RNA-seq from lung	polyA mRNA RNA-seq from MEL cell line	total RNA-seq from midbrain
total RNA-seq from neural tube	total RNA-seq from stomach